Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.54■□□□□ 0.24
ShfQ8CG80 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Gm40848-201ENSMUST00000221998 324 ntBASIC16.54■□□□□ 0.24
ShfQ8CG80 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Rarb-207ENSMUST00000225921 2756 ntBASIC16.54■□□□□ 0.24
ShfQ8CG80 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ShfQ8CG80 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ShfQ8CG80 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.53■□□□□ 0.24
ShfQ8CG80 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShfQ8CG80 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ShfQ8CG80 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.52■□□□□ 0.24
ShfQ8CG80 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ShfQ8CG80 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ShfQ8CG80 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.52■□□□□ 0.24
ShfQ8CG80 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShfQ8CG80 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.52■□□□□ 0.23
ShfQ8CG80 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ShfQ8CG80 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
ShfQ8CG80 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
ShfQ8CG80 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ShfQ8CG80 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ShfQ8CG80 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShfQ8CG80 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ShfQ8CG80 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShfQ8CG80 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.51■□□□□ 0.23
ShfQ8CG80 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShfQ8CG80 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.51■□□□□ 0.23
ShfQ8CG80 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.51■□□□□ 0.23
ShfQ8CG80 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.51■□□□□ 0.23
ShfQ8CG80 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShfQ8CG80 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShfQ8CG80 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShfQ8CG80 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ShfQ8CG80 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.51■□□□□ 0.23
ShfQ8CG80 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ShfQ8CG80 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShfQ8CG80 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShfQ8CG80 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShfQ8CG80 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.5■□□□□ 0.23
ShfQ8CG80 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShfQ8CG80 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShfQ8CG80 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShfQ8CG80 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.5■□□□□ 0.23
ShfQ8CG80 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
ShfQ8CG80 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.5■□□□□ 0.23
ShfQ8CG80 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.5■□□□□ 0.23
ShfQ8CG80 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ShfQ8CG80 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ShfQ8CG80 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ShfQ8CG80 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShfQ8CG80 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShfQ8CG80 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
ShfQ8CG80 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShfQ8CG80 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.49■□□□□ 0.23
ShfQ8CG80 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.49■□□□□ 0.23
ShfQ8CG80 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms