Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Smc4Q8CG47 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smc4Q8CG47 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smc4Q8CG47 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Smc4Q8CG47 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smc4Q8CG47 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Dio3-201ENSMUST00000097228 1449 ntBASIC22.83■■□□□ 1.25
Smc4Q8CG47 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.83■■□□□ 1.25
Smc4Q8CG47 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Smc4Q8CG47 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Smc4Q8CG47 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.83■■□□□ 1.24
Smc4Q8CG47 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Smc4Q8CG47 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.82■■□□□ 1.24
Smc4Q8CG47 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc4Q8CG47 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smc4Q8CG47 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smc4Q8CG47 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smc4Q8CG47 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Smc4Q8CG47 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Smc4Q8CG47 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.81■■□□□ 1.24
Smc4Q8CG47 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smc4Q8CG47 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smc4Q8CG47 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Smc4Q8CG47 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Gm27275-201ENSMUST00000184318 272 ntBASIC22.8■■□□□ 1.24
Smc4Q8CG47 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc4Q8CG47 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Gm22325-201ENSMUST00000158904 308 ntBASIC22.79■■□□□ 1.24
Smc4Q8CG47 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smc4Q8CG47 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc4Q8CG47 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc4Q8CG47 Gm2399-201ENSMUST00000104944 225 ntBASIC22.78■■□□□ 1.24
Smc4Q8CG47 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.78■■□□□ 1.24
Smc4Q8CG47 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.78■■□□□ 1.24
Smc4Q8CG47 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc4Q8CG47 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc4Q8CG47 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc4Q8CG47 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Smc4Q8CG47 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
Smc4Q8CG47 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc4Q8CG47 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc4Q8CG47 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Smc4Q8CG47 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Smc4Q8CG47 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.77■■□□□ 1.24
Smc4Q8CG47 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc4Q8CG47 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc4Q8CG47 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc4Q8CG47 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.76■■□□□ 1.23
Smc4Q8CG47 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms