Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb7Q8CDY9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb7Q8CDY9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb7Q8CDY9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb7Q8CDY9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Grk6-206ENSMUST00000224995 2971 ntBASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb7Q8CDY9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb7Q8CDY9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.52■□□□□ 0.55
Pcdhb7Q8CDY9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb7Q8CDY9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms