Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc46a2Q8CA03 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc46a2Q8CA03 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Gm12922-201ENSMUST00000120626 809 ntBASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.76■□□□□ 0.43
Slc46a2Q8CA03 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a2Q8CA03 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a2Q8CA03 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a2Q8CA03 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms