Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Brat1Q8C3R1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brat1Q8C3R1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brat1Q8C3R1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brat1Q8C3R1 Rab3c-203ENSMUST00000224180 967 ntBASIC19.53■□□□□ 0.72
Brat1Q8C3R1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brat1Q8C3R1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Brat1Q8C3R1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brat1Q8C3R1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brat1Q8C3R1 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Brat1Q8C3R1 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.52■□□□□ 0.72
Brat1Q8C3R1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Brat1Q8C3R1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Gm12441-201ENSMUST00000121806 588 ntBASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brat1Q8C3R1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brat1Q8C3R1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.5■□□□□ 0.71
Brat1Q8C3R1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brat1Q8C3R1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Brat1Q8C3R1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Brat1Q8C3R1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brat1Q8C3R1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.48■□□□□ 0.71
Brat1Q8C3R1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brat1Q8C3R1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.48■□□□□ 0.71
Brat1Q8C3R1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.48■□□□□ 0.71
Brat1Q8C3R1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brat1Q8C3R1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brat1Q8C3R1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.47■□□□□ 0.71
Brat1Q8C3R1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brat1Q8C3R1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brat1Q8C3R1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.47■□□□□ 0.71
Brat1Q8C3R1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.47■□□□□ 0.71
Brat1Q8C3R1 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.47■□□□□ 0.71
Brat1Q8C3R1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brat1Q8C3R1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Brat1Q8C3R1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brat1Q8C3R1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.45■□□□□ 0.7
Brat1Q8C3R1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brat1Q8C3R1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Brat1Q8C3R1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms