Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.5■□□□□ 0.23
Rft1Q8C3B8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rft1Q8C3B8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rft1Q8C3B8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Rft1Q8C3B8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.5■□□□□ 0.23
Rft1Q8C3B8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rft1Q8C3B8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rft1Q8C3B8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rft1Q8C3B8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Rft1Q8C3B8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.46■□□□□ 0.23
Rft1Q8C3B8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.46■□□□□ 0.22
Rft1Q8C3B8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Gm43060-201ENSMUST00000200621 289 ntBASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 AA386476-201ENSMUST00000098781 1665 ntBASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rft1Q8C3B8 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Gm40848-201ENSMUST00000221998 324 ntBASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rft1Q8C3B8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms