Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Vps9d1Q8C190 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps9d1Q8C190 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps9d1Q8C190 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps9d1Q8C190 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.31■□□□□ 0.36
Vps9d1Q8C190 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps9d1Q8C190 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vps9d1Q8C190 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps9d1Q8C190 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps9d1Q8C190 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps9d1Q8C190 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps9d1Q8C190 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps9d1Q8C190 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps9d1Q8C190 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps9d1Q8C190 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.27■□□□□ 0.36
Vps9d1Q8C190 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps9d1Q8C190 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Vps9d1Q8C190 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms