Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trub1Q8C0D0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trub1Q8C0D0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trub1Q8C0D0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.14■□□□□ 0.65
Trub1Q8C0D0 Gm6420-201ENSMUST00000193885 723 ntBASIC19.14■□□□□ 0.65
Trub1Q8C0D0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trub1Q8C0D0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trub1Q8C0D0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trub1Q8C0D0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trub1Q8C0D0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Trub1Q8C0D0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trub1Q8C0D0 Gm7514-201ENSMUST00000209475 934 ntBASIC19.13■□□□□ 0.65
Trub1Q8C0D0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trub1Q8C0D0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trub1Q8C0D0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trub1Q8C0D0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trub1Q8C0D0 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.13■□□□□ 0.65
Trub1Q8C0D0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trub1Q8C0D0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Nespas-201ENSMUST00000143738 1083 ntBASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trub1Q8C0D0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 AV356131-201ENSMUST00000206201 750 ntBASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trub1Q8C0D0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trub1Q8C0D0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trub1Q8C0D0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trub1Q8C0D0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trub1Q8C0D0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.1■□□□□ 0.65
Trub1Q8C0D0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trub1Q8C0D0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trub1Q8C0D0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trub1Q8C0D0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trub1Q8C0D0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trub1Q8C0D0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.08■□□□□ 0.65
Trub1Q8C0D0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trub1Q8C0D0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trub1Q8C0D0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trub1Q8C0D0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trub1Q8C0D0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trub1Q8C0D0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.08■□□□□ 0.64
Trub1Q8C0D0 Gm26571-201ENSMUST00000181399 666 ntBASIC19.08■□□□□ 0.64
Trub1Q8C0D0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trub1Q8C0D0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trub1Q8C0D0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trub1Q8C0D0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trub1Q8C0D0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trub1Q8C0D0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trub1Q8C0D0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms