Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 Fst-202ENSMUST00000223640 2612 ntBASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp1r3eQ8BRJ4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ppp1r3eQ8BRJ4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ppp1r3eQ8BRJ4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ppp1r3eQ8BRJ4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ppp1r3eQ8BRJ4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ppp1r3eQ8BRJ4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ppp1r3eQ8BRJ4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ppp1r3eQ8BRJ4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Gm18284-201ENSMUST00000172604 624 ntBASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ppp1r3eQ8BRJ4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ppp1r3eQ8BRJ4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Gm43137-201ENSMUST00000198052 594 ntBASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ppp1r3eQ8BRJ4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ppp1r3eQ8BRJ4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ppp1r3eQ8BRJ4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ppp1r3eQ8BRJ4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ppp1r3eQ8BRJ4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ppp1r3eQ8BRJ4 Smad6-203ENSMUST00000179458 273 ntBASIC17.28■□□□□ 0.36
Ppp1r3eQ8BRJ4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ppp1r3eQ8BRJ4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ppp1r3eQ8BRJ4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ppp1r3eQ8BRJ4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms