Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip4Q8BQP8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip4Q8BQP8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip4Q8BQP8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Gm12441-201ENSMUST00000121806 588 ntBASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip4Q8BQP8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip4Q8BQP8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.41■□□□□ 0.86
Rab11fip4Q8BQP8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms