Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smg1Q8BKX6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smg1Q8BKX6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Smg1Q8BKX6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Smg1Q8BKX6 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.85■□□□□ 0.13
Smg1Q8BKX6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smg1Q8BKX6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smg1Q8BKX6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Smg1Q8BKX6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smg1Q8BKX6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smg1Q8BKX6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Gm7284-201ENSMUST00000131667 944 ntBASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smg1Q8BKX6 Gm7860-201ENSMUST00000121190 879 ntBASIC15.8■□□□□ 0.12
Smg1Q8BKX6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smg1Q8BKX6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smg1Q8BKX6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smg1Q8BKX6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smg1Q8BKX6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.8■□□□□ 0.12
Smg1Q8BKX6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smg1Q8BKX6 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.8■□□□□ 0.12
Smg1Q8BKX6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smg1Q8BKX6 Golph3-202ENSMUST00000226517 2359 ntBASIC15.8■□□□□ 0.12
Smg1Q8BKX6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smg1Q8BKX6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.78■□□□□ 0.12
Smg1Q8BKX6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smg1Q8BKX6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smg1Q8BKX6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Smg1Q8BKX6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smg1Q8BKX6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.78■□□□□ 0.12
Smg1Q8BKX6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Smg1Q8BKX6 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.78■□□□□ 0.12
Smg1Q8BKX6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smg1Q8BKX6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms