Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
SpidrQ8BGX7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.71■■□□□ 1.07
SpidrQ8BGX7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SpidrQ8BGX7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SpidrQ8BGX7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SpidrQ8BGX7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SpidrQ8BGX7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.7■■□□□ 1.06
SpidrQ8BGX7 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.7■■□□□ 1.06
SpidrQ8BGX7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SpidrQ8BGX7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SpidrQ8BGX7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SpidrQ8BGX7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SpidrQ8BGX7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SpidrQ8BGX7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.69■■□□□ 1.06
SpidrQ8BGX7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SpidrQ8BGX7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SpidrQ8BGX7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SpidrQ8BGX7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SpidrQ8BGX7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SpidrQ8BGX7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SpidrQ8BGX7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SpidrQ8BGX7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SpidrQ8BGX7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SpidrQ8BGX7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SpidrQ8BGX7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Gm11643-201ENSMUST00000119578 864 ntBASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Gm10138-203ENSMUST00000206952 366 ntBASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SpidrQ8BGX7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SpidrQ8BGX7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SpidrQ8BGX7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SpidrQ8BGX7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SpidrQ8BGX7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms