Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim23Q8BGX0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Gm12441-201ENSMUST00000121806 588 ntBASIC17.86■□□□□ 0.45
Trim23Q8BGX0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim23Q8BGX0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Rab3c-203ENSMUST00000224180 967 ntBASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim23Q8BGX0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim23Q8BGX0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim23Q8BGX0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim23Q8BGX0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim23Q8BGX0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim23Q8BGX0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim23Q8BGX0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim23Q8BGX0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Gm5408-201ENSMUST00000197998 747 ntBASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim23Q8BGX0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim23Q8BGX0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms