Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ubp1Q811S7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubp1Q811S7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ubp1Q811S7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ubp1Q811S7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Gm6365-201ENSMUST00000054711 744 ntBASIC18.23■□□□□ 0.51
Ubp1Q811S7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubp1Q811S7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.22■□□□□ 0.51
Ubp1Q811S7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Ubp1Q811S7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubp1Q811S7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.21■□□□□ 0.51
Ubp1Q811S7 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.21■□□□□ 0.51
Ubp1Q811S7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubp1Q811S7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Ubp1Q811S7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ubp1Q811S7 BC021767-201ENSMUST00000126387 1716 ntBASIC18.2■□□□□ 0.5
Ubp1Q811S7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Ubp1Q811S7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubp1Q811S7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubp1Q811S7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubp1Q811S7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.18■□□□□ 0.5
Ubp1Q811S7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms