Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.65■□□□□ 0.42
Vrk1Q80X41 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Gm18666-201ENSMUST00000190039 958 ntBASIC17.65■□□□□ 0.42
Vrk1Q80X41 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.65■□□□□ 0.42
Vrk1Q80X41 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk1Q80X41 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vrk1Q80X41 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.64■□□□□ 0.41
Vrk1Q80X41 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Gm2399-201ENSMUST00000104944 225 ntBASIC17.64■□□□□ 0.41
Vrk1Q80X41 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.64■□□□□ 0.41
Vrk1Q80X41 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.63■□□□□ 0.41
Vrk1Q80X41 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.63■□□□□ 0.41
Vrk1Q80X41 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.63■□□□□ 0.41
Vrk1Q80X41 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vrk1Q80X41 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.62■□□□□ 0.41
Vrk1Q80X41 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Vrk1Q80X41 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.61■□□□□ 0.41
Vrk1Q80X41 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vrk1Q80X41 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.6■□□□□ 0.41
Vrk1Q80X41 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vrk1Q80X41 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.59■□□□□ 0.41
Vrk1Q80X41 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms