Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp38Q80UU2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Gm6365-201ENSMUST00000054711 744 ntBASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp38Q80UU2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp38Q80UU2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rpp38Q80UU2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpp38Q80UU2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpp38Q80UU2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpp38Q80UU2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rpp38Q80UU2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Gm7290-201ENSMUST00000104990 617 ntBASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Gm12918-201ENSMUST00000120234 636 ntBASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Gm15710-201ENSMUST00000121821 636 ntBASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Gm5075-201ENSMUST00000196916 622 ntBASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Rpp38Q80UU2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Gm7291-201ENSMUST00000199147 382 ntBASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp38Q80UU2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Gm22325-201ENSMUST00000158904 308 ntBASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.49■□□□□ 0.55
Rpp38Q80UU2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp38Q80UU2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp38Q80UU2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp38Q80UU2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.48■□□□□ 0.55
Rpp38Q80UU2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.48■□□□□ 0.55
Rpp38Q80UU2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.48■□□□□ 0.55
Rpp38Q80UU2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp38Q80UU2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rpp38Q80UU2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp38Q80UU2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms