Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Gm11249-201ENSMUST00000117071 859 ntBASIC17.04■□□□□ 0.32
Pif1Q80SX8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pif1Q80SX8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.03■□□□□ 0.32
Pif1Q80SX8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Gm18666-201ENSMUST00000190039 958 ntBASIC17.03■□□□□ 0.32
Pif1Q80SX8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pif1Q80SX8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.02■□□□□ 0.32
Pif1Q80SX8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pif1Q80SX8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.02■□□□□ 0.31
Pif1Q80SX8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pif1Q80SX8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Gm2399-201ENSMUST00000104944 225 ntBASIC17.01■□□□□ 0.31
Pif1Q80SX8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.01■□□□□ 0.31
Pif1Q80SX8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.01■□□□□ 0.31
Pif1Q80SX8 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.01■□□□□ 0.31
Pif1Q80SX8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pif1Q80SX8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pif1Q80SX8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17■□□□□ 0.31
Pif1Q80SX8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17■□□□□ 0.31
Pif1Q80SX8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pif1Q80SX8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pif1Q80SX8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pif1Q80SX8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pif1Q80SX8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.99■□□□□ 0.31
Pif1Q80SX8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pif1Q80SX8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pif1Q80SX8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pif1Q80SX8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pif1Q80SX8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pif1Q80SX8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pif1Q80SX8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pif1Q80SX8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms