Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf139Q7TMV1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Rnf139Q7TMV1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Gm7290-201ENSMUST00000104990 617 ntBASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Gm12918-201ENSMUST00000120234 636 ntBASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Gm15710-201ENSMUST00000121821 636 ntBASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Gm5075-201ENSMUST00000196916 622 ntBASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.83■□□□□ 0.77
Rnf139Q7TMV1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf139Q7TMV1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf139Q7TMV1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf139Q7TMV1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf139Q7TMV1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf139Q7TMV1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Gm6211-202ENSMUST00000167849 925 ntBASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf139Q7TMV1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf139Q7TMV1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf139Q7TMV1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rnf139Q7TMV1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf139Q7TMV1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rnf139Q7TMV1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf139Q7TMV1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf139Q7TMV1 Gm12933-201ENSMUST00000120203 872 ntBASIC19.8■□□□□ 0.76
Rnf139Q7TMV1 Mir5133-201ENSMUST00000174955 77 ntBASIC19.8■□□□□ 0.76
Rnf139Q7TMV1 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.8■□□□□ 0.76
Rnf139Q7TMV1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf139Q7TMV1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf139Q7TMV1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf139Q7TMV1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Gm13148-201ENSMUST00000118892 745 ntBASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms