Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Gm13146-201ENSMUST00000118508 780 ntBASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1aQ6ZQ88 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Kdm1aQ6ZQ88 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.48■□□□□ 0.87
Kdm1aQ6ZQ88 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1aQ6ZQ88 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1aQ6ZQ88 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Gm13234-201ENSMUST00000120010 747 ntBASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.45■□□□□ 0.86
Kdm1aQ6ZQ88 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.44■□□□□ 0.86
Kdm1aQ6ZQ88 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Kdm1aQ6ZQ88 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kdm1aQ6ZQ88 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kdm1aQ6ZQ88 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Kdm1aQ6ZQ88 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms