Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rnf220Q6PDX6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf220Q6PDX6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf220Q6PDX6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Gm7417-201ENSMUST00000192950 473 ntBASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf220Q6PDX6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf220Q6PDX6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf220Q6PDX6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Gm15546-201ENSMUST00000122095 826 ntBASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf220Q6PDX6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf220Q6PDX6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms