Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sp140Q6NSQ5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp140Q6NSQ5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.79■□□□□ 0.6
Sp140Q6NSQ5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp140Q6NSQ5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp140Q6NSQ5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.79■□□□□ 0.6
Sp140Q6NSQ5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp140Q6NSQ5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp140Q6NSQ5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp140Q6NSQ5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp140Q6NSQ5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp140Q6NSQ5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp140Q6NSQ5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.77■□□□□ 0.6
Sp140Q6NSQ5 Gm10493-201ENSMUST00000097270 612 ntBASIC18.77■□□□□ 0.6
Sp140Q6NSQ5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp140Q6NSQ5 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.77■□□□□ 0.6
Sp140Q6NSQ5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp140Q6NSQ5 Grk6-206ENSMUST00000224995 2971 ntBASIC18.77■□□□□ 0.59
Sp140Q6NSQ5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Sp140Q6NSQ5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sp140Q6NSQ5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sp140Q6NSQ5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sp140Q6NSQ5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp140Q6NSQ5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sp140Q6NSQ5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sp140Q6NSQ5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sp140Q6NSQ5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sp140Q6NSQ5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp140Q6NSQ5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp140Q6NSQ5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms