Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Krt39Q6IFX4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt39Q6IFX4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.44■□□□□ 0.86
Krt39Q6IFX4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Gm40848-201ENSMUST00000221998 324 ntBASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt39Q6IFX4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Gm38205-201ENSMUST00000192243 258 ntBASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Krt39Q6IFX4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Fst-202ENSMUST00000223640 2612 ntBASIC20.41■□□□□ 0.86
Krt39Q6IFX4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt39Q6IFX4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.4■□□□□ 0.86
Krt39Q6IFX4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms