Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt42Q6IFX2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt42Q6IFX2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt42Q6IFX2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt42Q6IFX2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt42Q6IFX2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.02■□□□□ 0.63
Krt42Q6IFX2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.02■□□□□ 0.63
Krt42Q6IFX2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.01■□□□□ 0.63
Krt42Q6IFX2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19■□□□□ 0.63
Krt42Q6IFX2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19■□□□□ 0.63
Krt42Q6IFX2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Krt42Q6IFX2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Krt42Q6IFX2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Krt42Q6IFX2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Krt42Q6IFX2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19■□□□□ 0.63
Krt42Q6IFX2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Krt42Q6IFX2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Gm7417-201ENSMUST00000192950 473 ntBASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt42Q6IFX2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.97■□□□□ 0.63
Krt42Q6IFX2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Krt42Q6IFX2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt42Q6IFX2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt42Q6IFX2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt42Q6IFX2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Krt42Q6IFX2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Krt42Q6IFX2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt42Q6IFX2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt42Q6IFX2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt42Q6IFX2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms