Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.2■■□□□ 1.14
Ltn1Q6A009 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ltn1Q6A009 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.19■■□□□ 1.14
Ltn1Q6A009 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ltn1Q6A009 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.18■■□□□ 1.14
Ltn1Q6A009 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ltn1Q6A009 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC22.18■■□□□ 1.14
Ltn1Q6A009 Gm7889-201ENSMUST00000185591 958 ntBASIC22.18■■□□□ 1.14
Ltn1Q6A009 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Ltn1Q6A009 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ltn1Q6A009 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ltn1Q6A009 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ltn1Q6A009 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ltn1Q6A009 Gm15375-201ENSMUST00000119510 849 ntBASIC22.17■■□□□ 1.14
Ltn1Q6A009 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ltn1Q6A009 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ltn1Q6A009 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Ltn1Q6A009 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ltn1Q6A009 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ltn1Q6A009 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ltn1Q6A009 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.16■■□□□ 1.14
Ltn1Q6A009 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ltn1Q6A009 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.15■■□□□ 1.14
Ltn1Q6A009 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ltn1Q6A009 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ltn1Q6A009 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ltn1Q6A009 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ltn1Q6A009 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ltn1Q6A009 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.15■■□□□ 1.14
Ltn1Q6A009 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Ltn1Q6A009 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ltn1Q6A009 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ltn1Q6A009 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ltn1Q6A009 Gm37292-201ENSMUST00000192062 758 ntBASIC22.14■■□□□ 1.13
Ltn1Q6A009 Gm43183-201ENSMUST00000200632 547 ntBASIC22.14■■□□□ 1.13
Ltn1Q6A009 Gm30025-201ENSMUST00000218555 728 ntBASIC22.14■■□□□ 1.13
Ltn1Q6A009 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC22.13■■□□□ 1.13
Ltn1Q6A009 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ltn1Q6A009 Gm42545-201ENSMUST00000202755 922 ntBASIC22.12■■□□□ 1.13
Ltn1Q6A009 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.12■■□□□ 1.13
Ltn1Q6A009 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ltn1Q6A009 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ltn1Q6A009 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ltn1Q6A009 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
Ltn1Q6A009 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ltn1Q6A009 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.11■■□□□ 1.13
Ltn1Q6A009 Gm11539-201ENSMUST00000119837 557 ntBASIC22.11■■□□□ 1.13
Ltn1Q6A009 Gm13436-201ENSMUST00000120418 567 ntBASIC22.11■■□□□ 1.13
Ltn1Q6A009 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ltn1Q6A009 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.11■■□□□ 1.13
Ltn1Q6A009 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC22.11■■□□□ 1.13
Ltn1Q6A009 Gm10138-203ENSMUST00000206952 366 ntBASIC22.11■■□□□ 1.13
Ltn1Q6A009 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ltn1Q6A009 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ltn1Q6A009 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Timm23-208ENSMUST00000226683 750 ntBASIC22.1■■□□□ 1.13
Ltn1Q6A009 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
Ltn1Q6A009 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ltn1Q6A009 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ltn1Q6A009 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms