Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.76■■□□□ 1.23
Col11a2Q64739 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Col11a2Q64739 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col11a2Q64739 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col11a2Q64739 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col11a2Q64739 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.75■■□□□ 1.23
Col11a2Q64739 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Col11a2Q64739 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.75■■□□□ 1.23
Col11a2Q64739 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col11a2Q64739 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Col11a2Q64739 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col11a2Q64739 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Col11a2Q64739 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Col11a2Q64739 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col11a2Q64739 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col11a2Q64739 Gm38285-201ENSMUST00000192928 922 ntBASIC22.74■■□□□ 1.23
Col11a2Q64739 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col11a2Q64739 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col11a2Q64739 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col11a2Q64739 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col11a2Q64739 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col11a2Q64739 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col11a2Q64739 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Col11a2Q64739 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Col11a2Q64739 AA414768-201ENSMUST00000121924 1257 ntBASIC22.73■■□□□ 1.23
Col11a2Q64739 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col11a2Q64739 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col11a2Q64739 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col11a2Q64739 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Col11a2Q64739 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
Col11a2Q64739 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Col11a2Q64739 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col11a2Q64739 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col11a2Q64739 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Col11a2Q64739 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.72■■□□□ 1.23
Col11a2Q64739 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col11a2Q64739 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.72■■□□□ 1.23
Col11a2Q64739 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col11a2Q64739 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.72■■□□□ 1.23
Col11a2Q64739 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC22.72■■□□□ 1.23
Col11a2Q64739 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col11a2Q64739 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col11a2Q64739 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col11a2Q64739 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col11a2Q64739 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col11a2Q64739 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Col11a2Q64739 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Col11a2Q64739 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.71■■□□□ 1.23
Col11a2Q64739 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC22.71■■□□□ 1.23
Col11a2Q64739 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col11a2Q64739 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col11a2Q64739 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.7■■□□□ 1.22
Col11a2Q64739 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC22.7■■□□□ 1.22
Col11a2Q64739 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Col11a2Q64739 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col11a2Q64739 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col11a2Q64739 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.7■■□□□ 1.22
Col11a2Q64739 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col11a2Q64739 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Col11a2Q64739 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.7■■□□□ 1.22
Col11a2Q64739 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Col11a2Q64739 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Col11a2Q64739 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col11a2Q64739 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.69■■□□□ 1.22
Col11a2Q64739 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col11a2Q64739 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col11a2Q64739 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col11a2Q64739 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col11a2Q64739 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.68■■□□□ 1.22
Col11a2Q64739 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Col11a2Q64739 Gm14464-201ENSMUST00000119658 1254 ntBASIC22.68■■□□□ 1.22
Col11a2Q64739 Mir6349-201ENSMUST00000184059 97 ntBASIC22.68■■□□□ 1.22
Col11a2Q64739 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col11a2Q64739 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Col11a2Q64739 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col11a2Q64739 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col11a2Q64739 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col11a2Q64739 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC22.67■■□□□ 1.22
Col11a2Q64739 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col11a2Q64739 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.67■■□□□ 1.22
Col11a2Q64739 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Col11a2Q64739 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Col11a2Q64739 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col11a2Q64739 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.66■■□□□ 1.22
Col11a2Q64739 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col11a2Q64739 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
Col11a2Q64739 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col11a2Q64739 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC22.65■■□□□ 1.22
Col11a2Q64739 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC22.65■■□□□ 1.22
Col11a2Q64739 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms