Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AtmQ62388 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
AtmQ62388 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AtmQ62388 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AtmQ62388 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AtmQ62388 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
AtmQ62388 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
AtmQ62388 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.68■□□□□ 0.42
AtmQ62388 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
AtmQ62388 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AtmQ62388 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AtmQ62388 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.68■□□□□ 0.42
AtmQ62388 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
AtmQ62388 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.67■□□□□ 0.42
AtmQ62388 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
AtmQ62388 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.67■□□□□ 0.42
AtmQ62388 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AtmQ62388 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AtmQ62388 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AtmQ62388 Gm14859-201ENSMUST00000117752 357 ntBASIC17.66■□□□□ 0.42
AtmQ62388 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AtmQ62388 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
AtmQ62388 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.65■□□□□ 0.42
AtmQ62388 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AtmQ62388 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
AtmQ62388 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AtmQ62388 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.65■□□□□ 0.42
AtmQ62388 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AtmQ62388 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AtmQ62388 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AtmQ62388 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AtmQ62388 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
AtmQ62388 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.64■□□□□ 0.41
AtmQ62388 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AtmQ62388 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AtmQ62388 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Gm42545-201ENSMUST00000202755 922 ntBASIC17.63■□□□□ 0.41
AtmQ62388 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Mtag2-201ENSMUST00000058665 714 ntBASIC17.63■□□□□ 0.41
AtmQ62388 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.63■□□□□ 0.41
AtmQ62388 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
AtmQ62388 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
AtmQ62388 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.63■□□□□ 0.41
AtmQ62388 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.63■□□□□ 0.41
AtmQ62388 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
AtmQ62388 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Gm28033-201ENSMUST00000184224 96 ntBASIC17.63■□□□□ 0.41
AtmQ62388 Gm3375-201ENSMUST00000203929 796 ntBASIC17.63■□□□□ 0.41
AtmQ62388 Odf3b-204ENSMUST00000227834 930 ntBASIC17.63■□□□□ 0.41
AtmQ62388 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AtmQ62388 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AtmQ62388 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AtmQ62388 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AtmQ62388 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AtmQ62388 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AtmQ62388 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
AtmQ62388 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
AtmQ62388 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AtmQ62388 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
AtmQ62388 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AtmQ62388 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AtmQ62388 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.61■□□□□ 0.41
AtmQ62388 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
AtmQ62388 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AtmQ62388 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AtmQ62388 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AtmQ62388 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms