Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.11■□□□□ 0.49
Six3Q62233 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.11■□□□□ 0.49
Six3Q62233 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Six3Q62233 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Six3Q62233 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Six3Q62233 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Six3Q62233 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six3Q62233 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.1■□□□□ 0.49
Six3Q62233 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.1■□□□□ 0.49
Six3Q62233 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Six3Q62233 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Six3Q62233 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Six3Q62233 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six3Q62233 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Six3Q62233 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Six3Q62233 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.09■□□□□ 0.49
Six3Q62233 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Six3Q62233 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.09■□□□□ 0.49
Six3Q62233 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.09■□□□□ 0.49
Six3Q62233 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.09■□□□□ 0.49
Six3Q62233 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.09■□□□□ 0.49
Six3Q62233 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Six3Q62233 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six3Q62233 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six3Q62233 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six3Q62233 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six3Q62233 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six3Q62233 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six3Q62233 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Six3Q62233 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six3Q62233 Gm9988-201ENSMUST00000069786 435 ntBASIC18.08■□□□□ 0.48
Six3Q62233 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.08■□□□□ 0.48
Six3Q62233 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Six3Q62233 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.08■□□□□ 0.48
Six3Q62233 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six3Q62233 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.08■□□□□ 0.48
Six3Q62233 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Six3Q62233 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six3Q62233 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.08■□□□□ 0.48
Six3Q62233 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.07■□□□□ 0.48
Six3Q62233 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.07■□□□□ 0.48
Six3Q62233 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.07■□□□□ 0.48
Six3Q62233 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.07■□□□□ 0.48
Six3Q62233 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.07■□□□□ 0.48
Six3Q62233 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Six3Q62233 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.07■□□□□ 0.48
Six3Q62233 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.07■□□□□ 0.48
Six3Q62233 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six3Q62233 Reep4-203ENSMUST00000226563 1444 ntBASIC18.06■□□□□ 0.48
Six3Q62233 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six3Q62233 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six3Q62233 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six3Q62233 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six3Q62233 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Six3Q62233 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.06■□□□□ 0.48
Six3Q62233 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six3Q62233 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six3Q62233 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.06■□□□□ 0.48
Six3Q62233 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six3Q62233 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms