Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.08■□□□□ 0.64
Six1Q62231 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Six1Q62231 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six1Q62231 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Six1Q62231 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six1Q62231 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.07■□□□□ 0.64
Six1Q62231 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six1Q62231 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Six1Q62231 Gm13146-201ENSMUST00000118508 780 ntBASIC19.07■□□□□ 0.64
Six1Q62231 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.07■□□□□ 0.64
Six1Q62231 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Six1Q62231 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six1Q62231 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Six1Q62231 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six1Q62231 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Six1Q62231 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six1Q62231 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Six1Q62231 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.07■□□□□ 0.64
Six1Q62231 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six1Q62231 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Six1Q62231 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Six1Q62231 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Six1Q62231 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Six1Q62231 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.06■□□□□ 0.64
Six1Q62231 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six1Q62231 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six1Q62231 Gm43060-201ENSMUST00000200621 289 ntBASIC19.06■□□□□ 0.64
Six1Q62231 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.06■□□□□ 0.64
Six1Q62231 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.06■□□□□ 0.64
Six1Q62231 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.06■□□□□ 0.64
Six1Q62231 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six1Q62231 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Six1Q62231 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six1Q62231 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Six1Q62231 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.05■□□□□ 0.64
Six1Q62231 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Six1Q62231 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six1Q62231 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.05■□□□□ 0.64
Six1Q62231 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.05■□□□□ 0.64
Six1Q62231 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.04■□□□□ 0.64
Six1Q62231 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.04■□□□□ 0.64
Six1Q62231 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six1Q62231 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.04■□□□□ 0.64
Six1Q62231 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six1Q62231 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.04■□□□□ 0.64
Six1Q62231 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.04■□□□□ 0.64
Six1Q62231 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six1Q62231 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six1Q62231 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six1Q62231 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six1Q62231 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six1Q62231 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six1Q62231 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.03■□□□□ 0.64
Six1Q62231 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.03■□□□□ 0.64
Six1Q62231 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.03■□□□□ 0.64
Six1Q62231 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Six1Q62231 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six1Q62231 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six1Q62231 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six1Q62231 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six1Q62231 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six1Q62231 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six1Q62231 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six1Q62231 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six1Q62231 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Six1Q62231 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Six1Q62231 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.01■□□□□ 0.63
Six1Q62231 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Six1Q62231 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Six1Q62231 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Six1Q62231 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.01■□□□□ 0.63
Six1Q62231 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.01■□□□□ 0.63
Six1Q62231 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.01■□□□□ 0.63
Six1Q62231 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Six1Q62231 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms