Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Scnn1aQ61180 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Gm11927-201ENSMUST00000118472 759 ntBASIC21.4■■□□□ 1.02
Scnn1aQ61180 Gm13158-201ENSMUST00000122007 736 ntBASIC21.4■■□□□ 1.02
Scnn1aQ61180 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.4■■□□□ 1.02
Scnn1aQ61180 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Scnn1aQ61180 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Scnn1aQ61180 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.39■■□□□ 1.01
Scnn1aQ61180 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.39■■□□□ 1.01
Scnn1aQ61180 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.39■■□□□ 1.01
Scnn1aQ61180 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scnn1aQ61180 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scnn1aQ61180 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scnn1aQ61180 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scnn1aQ61180 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scnn1aQ61180 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.38■■□□□ 1.01
Scnn1aQ61180 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scnn1aQ61180 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Scnn1aQ61180 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scnn1aQ61180 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scnn1aQ61180 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Scnn1aQ61180 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scnn1aQ61180 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scnn1aQ61180 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.37■■□□□ 1.01
Scnn1aQ61180 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scnn1aQ61180 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scnn1aQ61180 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scnn1aQ61180 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scnn1aQ61180 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scnn1aQ61180 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Gm10698-201ENSMUST00000182663 604 ntBASIC21.36■■□□□ 1.01
Scnn1aQ61180 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scnn1aQ61180 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scnn1aQ61180 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.35■■□□□ 1.01
Scnn1aQ61180 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Scnn1aQ61180 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scnn1aQ61180 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scnn1aQ61180 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scnn1aQ61180 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scnn1aQ61180 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.34■■□□□ 1.01
Scnn1aQ61180 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Scnn1aQ61180 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Scnn1aQ61180 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.34■■□□□ 1.01
Scnn1aQ61180 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scnn1aQ61180 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Scnn1aQ61180 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.33■■□□□ 1.01
Scnn1aQ61180 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Zfp783-201ENSMUST00000095946 670 ntBASIC21.33■■□□□ 1.01
Scnn1aQ61180 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scnn1aQ61180 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.33■■□□□ 1
Scnn1aQ61180 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scnn1aQ61180 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scnn1aQ61180 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.32■■□□□ 1
Scnn1aQ61180 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scnn1aQ61180 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms