Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm26571-201ENSMUST00000181399 666 ntBASIC18.81■□□□□ 0.6
Sdf4Q61112 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.81■□□□□ 0.6
Sdf4Q61112 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdf4Q61112 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sdf4Q61112 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.81■□□□□ 0.6
Sdf4Q61112 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sdf4Q61112 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdf4Q61112 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sdf4Q61112 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sdf4Q61112 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sdf4Q61112 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Sdf4Q61112 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.8■□□□□ 0.6
Sdf4Q61112 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdf4Q61112 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.79■□□□□ 0.6
Sdf4Q61112 Gm6420-201ENSMUST00000193885 723 ntBASIC18.79■□□□□ 0.6
Sdf4Q61112 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.79■□□□□ 0.6
Sdf4Q61112 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sdf4Q61112 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdf4Q61112 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.79■□□□□ 0.6
Sdf4Q61112 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sdf4Q61112 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sdf4Q61112 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sdf4Q61112 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.78■□□□□ 0.6
Sdf4Q61112 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.78■□□□□ 0.6
Sdf4Q61112 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sdf4Q61112 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Sdf4Q61112 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sdf4Q61112 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdf4Q61112 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdf4Q61112 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sdf4Q61112 Iqck-206ENSMUST00000208658 2891 ntBASIC18.77■□□□□ 0.6
Sdf4Q61112 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdf4Q61112 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdf4Q61112 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sdf4Q61112 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sdf4Q61112 Nespas-201ENSMUST00000143738 1083 ntBASIC18.77■□□□□ 0.6
Sdf4Q61112 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.77■□□□□ 0.6
Sdf4Q61112 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdf4Q61112 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.77■□□□□ 0.6
Sdf4Q61112 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.77■□□□□ 0.6
Sdf4Q61112 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdf4Q61112 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdf4Q61112 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdf4Q61112 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Sdf4Q61112 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.77■□□□□ 0.59
Sdf4Q61112 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.76■□□□□ 0.59
Sdf4Q61112 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.76■□□□□ 0.59
Sdf4Q61112 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sdf4Q61112 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdf4Q61112 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.76■□□□□ 0.59
Sdf4Q61112 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.76■□□□□ 0.59
Sdf4Q61112 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sdf4Q61112 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdf4Q61112 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdf4Q61112 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sdf4Q61112 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.75■□□□□ 0.59
Sdf4Q61112 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sdf4Q61112 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdf4Q61112 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Sdf4Q61112 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.75■□□□□ 0.59
Sdf4Q61112 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdf4Q61112 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms