Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Slc6a4Q60857 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Gm2559-201ENSMUST00000201323 363 ntBASIC19■□□□□ 0.63
Slc6a4Q60857 Gm44878-201ENSMUST00000205812 1295 ntBASIC19■□□□□ 0.63
Slc6a4Q60857 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a4Q60857 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.99■□□□□ 0.63
Slc6a4Q60857 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.99■□□□□ 0.63
Slc6a4Q60857 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.99■□□□□ 0.63
Slc6a4Q60857 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.98■□□□□ 0.63
Slc6a4Q60857 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.98■□□□□ 0.63
Slc6a4Q60857 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Dio3-201ENSMUST00000097228 1449 ntBASIC18.98■□□□□ 0.63
Slc6a4Q60857 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a4Q60857 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a4Q60857 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a4Q60857 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a4Q60857 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a4Q60857 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.97■□□□□ 0.63
Slc6a4Q60857 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a4Q60857 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Slc6a4Q60857 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Slc6a4Q60857 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Slc6a4Q60857 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a4Q60857 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.96■□□□□ 0.63
Slc6a4Q60857 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a4Q60857 Gm13168-201ENSMUST00000121771 632 ntBASIC18.96■□□□□ 0.63
Slc6a4Q60857 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.96■□□□□ 0.63
Slc6a4Q60857 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a4Q60857 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a4Q60857 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a4Q60857 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Slc6a4Q60857 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Slc6a4Q60857 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Gm22240-201ENSMUST00000175225 82 ntBASIC18.95■□□□□ 0.62
Slc6a4Q60857 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a4Q60857 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Gm8520-201ENSMUST00000186517 868 ntBASIC18.94■□□□□ 0.62
Slc6a4Q60857 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.94■□□□□ 0.62
Slc6a4Q60857 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms