Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nr1h4Q60641 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Nr1h4Q60641 Grk6-206ENSMUST00000224995 2971 ntBASIC17.64■□□□□ 0.42
Nr1h4Q60641 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.64■□□□□ 0.41
Nr1h4Q60641 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.64■□□□□ 0.41
Nr1h4Q60641 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Gm43137-201ENSMUST00000198052 594 ntBASIC17.64■□□□□ 0.41
Nr1h4Q60641 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.64■□□□□ 0.41
Nr1h4Q60641 Gm9847-201ENSMUST00000052528 599 ntBASIC17.64■□□□□ 0.41
Nr1h4Q60641 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h4Q60641 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.63■□□□□ 0.41
Nr1h4Q60641 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.63■□□□□ 0.41
Nr1h4Q60641 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.62■□□□□ 0.41
Nr1h4Q60641 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.62■□□□□ 0.41
Nr1h4Q60641 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nr1h4Q60641 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Gm7860-201ENSMUST00000121190 879 ntBASIC17.62■□□□□ 0.41
Nr1h4Q60641 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.62■□□□□ 0.41
Nr1h4Q60641 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.61■□□□□ 0.41
Nr1h4Q60641 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nr1h4Q60641 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.6■□□□□ 0.41
Nr1h4Q60641 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.6■□□□□ 0.41
Nr1h4Q60641 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.6■□□□□ 0.41
Nr1h4Q60641 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Nr1h4Q60641 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms