Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 AA386476-201ENSMUST00000098781 1665 ntBASIC15.16■□□□□ 0.02
Trav8d-1Q5R1H8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Gm27454-201ENSMUST00000185090 204 ntBASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-1Q5R1H8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Gm43137-201ENSMUST00000198052 594 ntBASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-1Q5R1H8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-1Q5R1H8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.12■□□□□ 0.01
Trav8d-1Q5R1H8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms