Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Gm38205-201ENSMUST00000192243 258 ntBASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-3Q5R1E6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-3Q5R1E6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Gm45417-201ENSMUST00000209533 758 ntBASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-3Q5R1E6 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Gm43017-201ENSMUST00000198296 752 ntBASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-3Q5R1E6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-3Q5R1E6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Gm43060-201ENSMUST00000200621 289 ntBASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms