Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
Col27a1Q5QNQ9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.14■□□□□ 0.5
Col27a1Q5QNQ9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col27a1Q5QNQ9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.13■□□□□ 0.49
Col27a1Q5QNQ9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col27a1Q5QNQ9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col27a1Q5QNQ9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col27a1Q5QNQ9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.13■□□□□ 0.49
Col27a1Q5QNQ9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col27a1Q5QNQ9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.13■□□□□ 0.49
Col27a1Q5QNQ9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Gm12085-201ENSMUST00000119263 940 ntBASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Gm7461-201ENSMUST00000058918 827 ntBASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col27a1Q5QNQ9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col27a1Q5QNQ9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.11■□□□□ 0.49
Col27a1Q5QNQ9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col27a1Q5QNQ9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col27a1Q5QNQ9 Gm27463-201ENSMUST00000183569 57 ntBASIC18.11■□□□□ 0.49
Col27a1Q5QNQ9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col27a1Q5QNQ9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Gm28033-201ENSMUST00000184224 96 ntBASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col27a1Q5QNQ9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col27a1Q5QNQ9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col27a1Q5QNQ9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col27a1Q5QNQ9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.08■□□□□ 0.49
Col27a1Q5QNQ9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.08■□□□□ 0.49
Col27a1Q5QNQ9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col27a1Q5QNQ9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col27a1Q5QNQ9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.08■□□□□ 0.48
Col27a1Q5QNQ9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col27a1Q5QNQ9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.08■□□□□ 0.48
Col27a1Q5QNQ9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col27a1Q5QNQ9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Col27a1Q5QNQ9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Col27a1Q5QNQ9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms