Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.34■□□□□ 0.85
Scarf1Q5ND28 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Scarf1Q5ND28 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scarf1Q5ND28 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scarf1Q5ND28 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scarf1Q5ND28 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.34■□□□□ 0.85
Scarf1Q5ND28 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scarf1Q5ND28 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Scarf1Q5ND28 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scarf1Q5ND28 Gm4968-201ENSMUST00000071458 858 ntBASIC20.33■□□□□ 0.85
Scarf1Q5ND28 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scarf1Q5ND28 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scarf1Q5ND28 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.33■□□□□ 0.84
Scarf1Q5ND28 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.32■□□□□ 0.84
Scarf1Q5ND28 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scarf1Q5ND28 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Gm5408-201ENSMUST00000197998 747 ntBASIC20.31■□□□□ 0.84
Scarf1Q5ND28 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scarf1Q5ND28 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scarf1Q5ND28 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scarf1Q5ND28 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scarf1Q5ND28 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.3■□□□□ 0.84
Scarf1Q5ND28 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scarf1Q5ND28 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scarf1Q5ND28 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Scarf1Q5ND28 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scarf1Q5ND28 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Rab3c-203ENSMUST00000224180 967 ntBASIC20.28■□□□□ 0.84
Scarf1Q5ND28 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scarf1Q5ND28 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.27■□□□□ 0.84
Scarf1Q5ND28 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scarf1Q5ND28 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Scarf1Q5ND28 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scarf1Q5ND28 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scarf1Q5ND28 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scarf1Q5ND28 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms