Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf43Q5NCP0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf43Q5NCP0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf43Q5NCP0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf43Q5NCP0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf43Q5NCP0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf43Q5NCP0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.83■□□□□ 0.61
Rnf43Q5NCP0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf43Q5NCP0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf43Q5NCP0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf43Q5NCP0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf43Q5NCP0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.83■□□□□ 0.61
Rnf43Q5NCP0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf43Q5NCP0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf43Q5NCP0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf43Q5NCP0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf43Q5NCP0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rnf43Q5NCP0 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.83■□□□□ 0.6
Rnf43Q5NCP0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.83■□□□□ 0.6
Rnf43Q5NCP0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf43Q5NCP0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms