Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Urb1Q571H0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Urb1Q571H0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Urb1Q571H0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Urb1Q571H0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Urb1Q571H0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Urb1Q571H0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Urb1Q571H0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Urb1Q571H0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Urb1Q571H0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Urb1Q571H0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.01■□□□□ 0.31
Urb1Q571H0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Urb1Q571H0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Urb1Q571H0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Urb1Q571H0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.01■□□□□ 0.31
Urb1Q571H0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.01■□□□□ 0.31
Urb1Q571H0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Urb1Q571H0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Urb1Q571H0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Urb1Q571H0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Urb1Q571H0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.01■□□□□ 0.31
Urb1Q571H0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Urb1Q571H0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Urb1Q571H0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Urb1Q571H0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17■□□□□ 0.31
Urb1Q571H0 Gm6659-201ENSMUST00000174752 547 ntBASIC17■□□□□ 0.31
Urb1Q571H0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17■□□□□ 0.31
Urb1Q571H0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Urb1Q571H0 Gm16042-201ENSMUST00000204813 1247 ntBASIC17■□□□□ 0.31
Urb1Q571H0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17■□□□□ 0.31
Urb1Q571H0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Urb1Q571H0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Urb1Q571H0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.99■□□□□ 0.31
Urb1Q571H0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Urb1Q571H0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Urb1Q571H0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.99■□□□□ 0.31
Urb1Q571H0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Urb1Q571H0 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.99■□□□□ 0.31
Urb1Q571H0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Urb1Q571H0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.98■□□□□ 0.31
Urb1Q571H0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.98■□□□□ 0.31
Urb1Q571H0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Urb1Q571H0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Urb1Q571H0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Urb1Q571H0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.98■□□□□ 0.31
Urb1Q571H0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.98■□□□□ 0.31
Urb1Q571H0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Urb1Q571H0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.97■□□□□ 0.31
Urb1Q571H0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.97■□□□□ 0.31
Urb1Q571H0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.97■□□□□ 0.31
Urb1Q571H0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Urb1Q571H0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Urb1Q571H0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.96■□□□□ 0.31
Urb1Q571H0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.96■□□□□ 0.31
Urb1Q571H0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Urb1Q571H0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Urb1Q571H0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms