Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Gm11249-201ENSMUST00000117071 859 ntBASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.45■■□□□ 1.02
Rc3h1Q4VGL6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Gm2399-201ENSMUST00000104944 225 ntBASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Rc3h1Q4VGL6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h1Q4VGL6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.42■■□□□ 1.02
Rc3h1Q4VGL6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rc3h1Q4VGL6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.42■■□□□ 1.02
Rc3h1Q4VGL6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rc3h1Q4VGL6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rc3h1Q4VGL6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.42■■□□□ 1.02
Rc3h1Q4VGL6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rc3h1Q4VGL6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rc3h1Q4VGL6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h1Q4VGL6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Gm5643-201ENSMUST00000117081 966 ntBASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h1Q4VGL6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rc3h1Q4VGL6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.39■■□□□ 1.01
Rc3h1Q4VGL6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rc3h1Q4VGL6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rc3h1Q4VGL6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rc3h1Q4VGL6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms