Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38aQ4FK66 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.66■■□□□ 1.06
Prpf38aQ4FK66 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38aQ4FK66 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38aQ4FK66 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38aQ4FK66 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38aQ4FK66 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38aQ4FK66 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38aQ4FK66 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38aQ4FK66 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Prpf38aQ4FK66 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Prpf38aQ4FK66 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.64■■□□□ 1.05
Prpf38aQ4FK66 Gm2399-201ENSMUST00000104944 225 ntBASIC21.64■■□□□ 1.05
Prpf38aQ4FK66 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf38aQ4FK66 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf38aQ4FK66 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Prpf38aQ4FK66 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf38aQ4FK66 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf38aQ4FK66 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf38aQ4FK66 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Gm10812-201ENSMUST00000099864 546 ntBASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38aQ4FK66 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Gm22325-201ENSMUST00000158904 308 ntBASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38aQ4FK66 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38aQ4FK66 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf38aQ4FK66 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf38aQ4FK66 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.6■■□□□ 1.05
Prpf38aQ4FK66 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf38aQ4FK66 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.6■■□□□ 1.05
Prpf38aQ4FK66 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf38aQ4FK66 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.6■■□□□ 1.05
Prpf38aQ4FK66 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf38aQ4FK66 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38aQ4FK66 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38aQ4FK66 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Prpf38aQ4FK66 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Prpf38aQ4FK66 Flg-201ENSMUST00000050758 1488 ntBASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms