Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Rnf223Q3UV31 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf223Q3UV31 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf223Q3UV31 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf223Q3UV31 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf223Q3UV31 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf223Q3UV31 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf223Q3UV31 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Gm8520-201ENSMUST00000186517 868 ntBASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf223Q3UV31 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf223Q3UV31 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf223Q3UV31 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf223Q3UV31 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf223Q3UV31 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Rnf223Q3UV31 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18■□□□□ 0.47
Rnf223Q3UV31 Gm13168-201ENSMUST00000121771 632 ntBASIC18■□□□□ 0.47
Rnf223Q3UV31 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18■□□□□ 0.47
Rnf223Q3UV31 Gm22240-201ENSMUST00000175225 82 ntBASIC18■□□□□ 0.47
Rnf223Q3UV31 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18■□□□□ 0.47
Rnf223Q3UV31 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf223Q3UV31 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf223Q3UV31 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf223Q3UV31 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf223Q3UV31 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.99■□□□□ 0.47
Rnf223Q3UV31 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf223Q3UV31 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf223Q3UV31 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf223Q3UV31 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf223Q3UV31 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf223Q3UV31 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf223Q3UV31 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Gm2399-201ENSMUST00000104944 225 ntBASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Gm11249-201ENSMUST00000117071 859 ntBASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf223Q3UV31 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf223Q3UV31 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf223Q3UV31 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rnf223Q3UV31 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf223Q3UV31 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.95■□□□□ 0.46
Rnf223Q3UV31 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf223Q3UV31 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rnf223Q3UV31 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms