Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Zfp783-201ENSMUST00000095946 670 ntBASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam196aQ3USH1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.66■□□□□ 0.58
Fam196aQ3USH1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Gm45058-201ENSMUST00000205810 766 ntBASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Gm7461-201ENSMUST00000058918 827 ntBASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Fam196aQ3USH1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Gm17971-201ENSMUST00000190239 806 ntBASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Fam196aQ3USH1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Fam196aQ3USH1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam196aQ3USH1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fam196aQ3USH1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fam196aQ3USH1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Fam196aQ3USH1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam196aQ3USH1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam196aQ3USH1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fam196aQ3USH1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam196aQ3USH1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam196aQ3USH1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms