Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Naf1Q3UMQ8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.82■□□□□ 0.6
Naf1Q3UMQ8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Gm13168-201ENSMUST00000121771 632 ntBASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Gm8520-201ENSMUST00000186517 868 ntBASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Naf1Q3UMQ8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Gm44549-201ENSMUST00000208351 577 ntBASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Naf1Q3UMQ8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Naf1Q3UMQ8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
Naf1Q3UMQ8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Dio3-201ENSMUST00000097228 1449 ntBASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Gm2559-201ENSMUST00000201323 363 ntBASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.77■□□□□ 0.6
Naf1Q3UMQ8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Naf1Q3UMQ8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Naf1Q3UMQ8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Naf1Q3UMQ8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Naf1Q3UMQ8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms