Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa6Q3UH99 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Gm11927-201ENSMUST00000118472 759 ntBASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa6Q3UH99 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Gm18666-201ENSMUST00000190039 958 ntBASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa6Q3UH99 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa6Q3UH99 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Shisa6Q3UH99 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.77■□□□□ 0.27
Shisa6Q3UH99 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Shisa6Q3UH99 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa6Q3UH99 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa6Q3UH99 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Gm13158-201ENSMUST00000122007 736 ntBASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Gm22325-201ENSMUST00000158904 308 ntBASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa6Q3UH99 Flg-201ENSMUST00000050758 1488 ntBASIC16.75■□□□□ 0.27
Shisa6Q3UH99 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Shisa6Q3UH99 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa6Q3UH99 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa6Q3UH99 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa6Q3UH99 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa6Q3UH99 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.75■□□□□ 0.27
Shisa6Q3UH99 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.75■□□□□ 0.27
Shisa6Q3UH99 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.75■□□□□ 0.27
Shisa6Q3UH99 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa6Q3UH99 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.75■□□□□ 0.27
Shisa6Q3UH99 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Mtag2-201ENSMUST00000058665 714 ntBASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa6Q3UH99 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa6Q3UH99 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa6Q3UH99 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa6Q3UH99 Gm15378-201ENSMUST00000121894 207 ntBASIC16.73■□□□□ 0.27
Shisa6Q3UH99 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.73■□□□□ 0.27
Shisa6Q3UH99 Mir6982-201ENSMUST00000184354 68 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms