Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Gm12441-201ENSMUST00000121806 588 ntBASIC21.78■■□□□ 1.08
Limch1Q3UH68 Mir5133-201ENSMUST00000174955 77 ntBASIC21.78■■□□□ 1.08
Limch1Q3UH68 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Limch1Q3UH68 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.77■■□□□ 1.08
Limch1Q3UH68 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limch1Q3UH68 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.77■■□□□ 1.07
Limch1Q3UH68 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Limch1Q3UH68 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.76■■□□□ 1.07
Limch1Q3UH68 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.75■■□□□ 1.07
Limch1Q3UH68 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limch1Q3UH68 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Limch1Q3UH68 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Limch1Q3UH68 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Limch1Q3UH68 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Limch1Q3UH68 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Limch1Q3UH68 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Limch1Q3UH68 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limch1Q3UH68 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limch1Q3UH68 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limch1Q3UH68 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limch1Q3UH68 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limch1Q3UH68 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limch1Q3UH68 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limch1Q3UH68 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limch1Q3UH68 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limch1Q3UH68 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Gm13146-201ENSMUST00000118508 780 ntBASIC21.71■■□□□ 1.07
Limch1Q3UH68 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.71■■□□□ 1.07
Limch1Q3UH68 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limch1Q3UH68 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Limch1Q3UH68 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Limch1Q3UH68 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms