Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col5a2Q3U962 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Col5a2Q3U962 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col5a2Q3U962 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col5a2Q3U962 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col5a2Q3U962 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.18■■□□□ 1.14
Col5a2Q3U962 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col5a2Q3U962 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.18■■□□□ 1.14
Col5a2Q3U962 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Col5a2Q3U962 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col5a2Q3U962 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col5a2Q3U962 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.17■■□□□ 1.14
Col5a2Q3U962 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Col5a2Q3U962 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col5a2Q3U962 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col5a2Q3U962 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Col5a2Q3U962 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col5a2Q3U962 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col5a2Q3U962 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.17■■□□□ 1.14
Col5a2Q3U962 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col5a2Q3U962 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col5a2Q3U962 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Col5a2Q3U962 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Col5a2Q3U962 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col5a2Q3U962 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Col5a2Q3U962 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
Col5a2Q3U962 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col5a2Q3U962 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col5a2Q3U962 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Col5a2Q3U962 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col5a2Q3U962 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col5a2Q3U962 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col5a2Q3U962 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.14■■□□□ 1.13
Col5a2Q3U962 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Col5a2Q3U962 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col5a2Q3U962 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Col5a2Q3U962 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col5a2Q3U962 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.14■■□□□ 1.13
Col5a2Q3U962 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col5a2Q3U962 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
Col5a2Q3U962 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col5a2Q3U962 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col5a2Q3U962 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col5a2Q3U962 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Gm10013-201ENSMUST00000106074 672 ntBASIC22.13■■□□□ 1.13
Col5a2Q3U962 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col5a2Q3U962 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col5a2Q3U962 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col5a2Q3U962 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col5a2Q3U962 Gm38285-201ENSMUST00000192928 922 ntBASIC22.12■■□□□ 1.13
Col5a2Q3U962 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col5a2Q3U962 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
Col5a2Q3U962 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col5a2Q3U962 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Col5a2Q3U962 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Col5a2Q3U962 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col5a2Q3U962 Gm18959-201ENSMUST00000208954 655 ntBASIC22.11■■□□□ 1.13
Col5a2Q3U962 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col5a2Q3U962 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col5a2Q3U962 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col5a2Q3U962 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Col5a2Q3U962 AA414768-201ENSMUST00000121924 1257 ntBASIC22.1■■□□□ 1.13
Col5a2Q3U962 Gm12382-201ENSMUST00000122005 922 ntBASIC22.1■■□□□ 1.13
Col5a2Q3U962 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col5a2Q3U962 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col5a2Q3U962 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.09■■□□□ 1.13
Col5a2Q3U962 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms