Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc4Q3TCX3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc4Q3TCX3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc4Q3TCX3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc4Q3TCX3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc4Q3TCX3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc4Q3TCX3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc4Q3TCX3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc4Q3TCX3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc4Q3TCX3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc4Q3TCX3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Gm7860-201ENSMUST00000121190 879 ntBASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc4Q3TCX3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Khdc4Q3TCX3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Gm8520-201ENSMUST00000186517 868 ntBASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc4Q3TCX3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.54■□□□□ 0.4
Khdc4Q3TCX3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms