Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
IhhP97812 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IhhP97812 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IhhP97812 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.33■□□□□ 0.68
IhhP97812 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IhhP97812 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IhhP97812 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IhhP97812 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
IhhP97812 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IhhP97812 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IhhP97812 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
IhhP97812 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
IhhP97812 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IhhP97812 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
IhhP97812 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Gm44549-201ENSMUST00000208351 577 ntBASIC19.31■□□□□ 0.68
IhhP97812 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.31■□□□□ 0.68
IhhP97812 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.31■□□□□ 0.68
IhhP97812 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IhhP97812 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.31■□□□□ 0.68
IhhP97812 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.3■□□□□ 0.68
IhhP97812 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
IhhP97812 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.3■□□□□ 0.68
IhhP97812 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.3■□□□□ 0.68
IhhP97812 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.3■□□□□ 0.68
IhhP97812 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.3■□□□□ 0.68
IhhP97812 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IhhP97812 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
IhhP97812 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.29■□□□□ 0.68
IhhP97812 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IhhP97812 Gm37856-201ENSMUST00000191634 999 ntBASIC19.29■□□□□ 0.68
IhhP97812 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
IhhP97812 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.29■□□□□ 0.68
IhhP97812 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IhhP97812 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IhhP97812 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.29■□□□□ 0.68
IhhP97812 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.28■□□□□ 0.68
IhhP97812 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
IhhP97812 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
IhhP97812 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.28■□□□□ 0.68
IhhP97812 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.28■□□□□ 0.68
IhhP97812 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
IhhP97812 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IhhP97812 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.28■□□□□ 0.68
IhhP97812 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IhhP97812 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IhhP97812 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IhhP97812 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IhhP97812 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IhhP97812 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IhhP97812 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.27■□□□□ 0.68
IhhP97812 Gm27275-201ENSMUST00000184318 272 ntBASIC19.27■□□□□ 0.68
IhhP97812 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IhhP97812 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IhhP97812 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IhhP97812 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IhhP97812 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.26■□□□□ 0.67
IhhP97812 Gm12896-201ENSMUST00000118430 226 ntBASIC19.26■□□□□ 0.67
IhhP97812 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IhhP97812 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
IhhP97812 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IhhP97812 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IhhP97812 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.26■□□□□ 0.67
IhhP97812 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms