Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
Trim43cP86449 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43cP86449 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim43cP86449 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43cP86449 Gm42569-201ENSMUST00000200539 472 ntBASIC20.2■□□□□ 0.82
Trim43cP86449 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43cP86449 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43cP86449 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43cP86449 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.19■□□□□ 0.82
Trim43cP86449 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Gm27405-201ENSMUST00000184201 112 ntBASIC20.19■□□□□ 0.82
Trim43cP86449 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Trim43cP86449 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43cP86449 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim43cP86449 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Trim43cP86449 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43cP86449 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Trim43cP86449 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43cP86449 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim43cP86449 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim43cP86449 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43cP86449 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43cP86449 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43cP86449 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43cP86449 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Trim43cP86449 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43cP86449 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43cP86449 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.17■□□□□ 0.82
Trim43cP86449 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43cP86449 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43cP86449 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43cP86449 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43cP86449 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43cP86449 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43cP86449 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Trim43cP86449 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim43cP86449 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim43cP86449 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.16■□□□□ 0.82
Trim43cP86449 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43cP86449 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim43cP86449 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim43cP86449 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim43cP86449 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim43cP86449 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim43cP86449 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim43cP86449 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim43cP86449 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim43cP86449 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Gm7291-201ENSMUST00000199147 382 ntBASIC20.13■□□□□ 0.81
Trim43cP86449 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.13■□□□□ 0.81
Trim43cP86449 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim43cP86449 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim43cP86449 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim43cP86449 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim43cP86449 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim43cP86449 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim43cP86449 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim43cP86449 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim43cP86449 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43cP86449 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43cP86449 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43cP86449 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms