Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcbP82349 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.54■□□□□ 0.24
SgcbP82349 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.54■□□□□ 0.24
SgcbP82349 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcbP82349 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcbP82349 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcbP82349 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SgcbP82349 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcbP82349 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcbP82349 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcbP82349 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcbP82349 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcbP82349 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SgcbP82349 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SgcbP82349 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.53■□□□□ 0.24
SgcbP82349 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SgcbP82349 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SgcbP82349 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SgcbP82349 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SgcbP82349 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SgcbP82349 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.52■□□□□ 0.24
SgcbP82349 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SgcbP82349 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SgcbP82349 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.52■□□□□ 0.24
SgcbP82349 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.52■□□□□ 0.24
SgcbP82349 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SgcbP82349 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SgcbP82349 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SgcbP82349 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SgcbP82349 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SgcbP82349 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SgcbP82349 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SgcbP82349 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SgcbP82349 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SgcbP82349 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SgcbP82349 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SgcbP82349 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.51■□□□□ 0.23
SgcbP82349 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SgcbP82349 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SgcbP82349 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.51■□□□□ 0.23
SgcbP82349 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.51■□□□□ 0.23
SgcbP82349 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcbP82349 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SgcbP82349 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SgcbP82349 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SgcbP82349 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SgcbP82349 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcbP82349 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.49■□□□□ 0.23
SgcbP82349 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SgcbP82349 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SgcbP82349 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SgcbP82349 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcbP82349 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SgcbP82349 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SgcbP82349 Gm6211-202ENSMUST00000167849 925 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms